Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H2P55055 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 FLJ16779-201ENST00000612722 7638 ntBASIC15.48■□□□□ 0.07
NR1H2P55055 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H2P55055 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.48■□□□□ 0.07
NR1H2P55055 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H2P55055 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.48■□□□□ 0.07
NR1H2P55055 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
NR1H2P55055 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 IL9RP2-201ENST00000423948 1312 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H2P55055 FAM220CP-201ENST00000395253 831 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 AC018712.1-201ENST00000455767 687 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 RNPS1P1-201ENST00000507437 918 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H2P55055 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H2P55055 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.47■□□□□ 0.07
NR1H2P55055 AL671883.3-201ENST00000603274 991 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 AL109954.1-202ENST00000564051 2148 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NR1H2P55055 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.47■□□□□ 0.07
NR1H2P55055 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H2P55055 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H2P55055 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
NR1H2P55055 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 AC139749.1-202ENST00000617529 3139 ntBASIC15.46■□□□□ 0.07
NR1H2P55055 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 AP005117.1-201ENST00000584346 1413 ntBASIC15.46■□□□□ 0.07
NR1H2P55055 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.46■□□□□ 0.07
NR1H2P55055 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 RNA5SP419-201ENST00000515908 135 ntBASIC15.46■□□□□ 0.07
NR1H2P55055 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H2P55055 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.46■□□□□ 0.07
NR1H2P55055 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms