Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA2D1P54289 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 U82695.1-201ENST00000635752 1889 ntBASIC17.21■□□□□ 0.35
CACNA2D1P54289 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 AC097493.3-201ENST00000509725 367 ntBASIC17.21■□□□□ 0.35
CACNA2D1P54289 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA2D1P54289 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA2D1P54289 AC092364.2-201ENST00000596710 2692 ntBASIC17.21■□□□□ 0.35
CACNA2D1P54289 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
CACNA2D1P54289 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA2D1P54289 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA2D1P54289 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.34
CACNA2D1P54289 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA2D1P54289 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 SPDYE12P-201ENST00000618416 771 ntBASIC17.2■□□□□ 0.34
CACNA2D1P54289 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.2■□□□□ 0.34
CACNA2D1P54289 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA2D1P54289 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CACNA2D1P54289 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA2D1P54289 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 REXO1L8P-201ENST00000604378 1897 ntBASIC17.19■□□□□ 0.34
CACNA2D1P54289 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 AC093214.1-201ENST00000511688 1107 ntBASIC17.19■□□□□ 0.34
CACNA2D1P54289 AC069120.2-201ENST00000524091 540 ntBASIC17.19■□□□□ 0.34
CACNA2D1P54289 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA2D1P54289 SPCS2P1-201ENST00000561636 679 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms