Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.48□□□□□ -0.09
SRP9P49458 PAWRP1-201ENST00000451083 565 ntBASIC14.48□□□□□ -0.09
SRP9P49458 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.48□□□□□ -0.09
SRP9P49458 RNA5SP415-201ENST00000517246 115 ntBASIC14.48□□□□□ -0.09
SRP9P49458 IGHV3-22-201ENST00000520721 359 ntBASIC14.48□□□□□ -0.09
SRP9P49458 UNC93B6-202ENST00000528242 690 ntBASIC14.48□□□□□ -0.09
SRP9P49458 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.48□□□□□ -0.09
SRP9P49458 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
SRP9P49458 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.48□□□□□ -0.09
SRP9P49458 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.48□□□□□ -0.09
SRP9P49458 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SRP9P49458 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SRP9P49458 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SRP9P49458 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.47□□□□□ -0.09
SRP9P49458 ZNF259P1-201ENST00000407656 1365 ntBASIC14.47□□□□□ -0.09
SRP9P49458 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.47□□□□□ -0.09
SRP9P49458 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SRP9P49458 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.47□□□□□ -0.09
SRP9P49458 HLA-J-202ENST00000469281 1241 ntBASIC14.47□□□□□ -0.09
SRP9P49458 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 MIR4751-201ENST00000578027 74 ntBASIC14.47□□□□□ -0.09
SRP9P49458 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.47□□□□□ -0.09
SRP9P49458 Z83851.2-201ENST00000609564 659 ntBASIC14.47□□□□□ -0.09
SRP9P49458 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRP9P49458 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SRP9P49458 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.46□□□□□ -0.09
SRP9P49458 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.46□□□□□ -0.09
SRP9P49458 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.46□□□□□ -0.09
SRP9P49458 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
SRP9P49458 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.46□□□□□ -0.09
SRP9P49458 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.46□□□□□ -0.09
SRP9P49458 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRP9P49458 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.46□□□□□ -0.09
SRP9P49458 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SRP9P49458 PRSS29P-201ENST00000440800 595 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms