Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.19■□□□□ 0.18
CSNK1DP48730 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC009477.1-201ENST00000452936 217 ntBASIC16.19■□□□□ 0.18
CSNK1DP48730 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.19■□□□□ 0.18
CSNK1DP48730 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.19■□□□□ 0.18
CSNK1DP48730 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.19■□□□□ 0.18
CSNK1DP48730 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 AL513523.2-202ENST00000427283 2040 ntBASIC16.19■□□□□ 0.18
CSNK1DP48730 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.19■□□□□ 0.18
CSNK1DP48730 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1DP48730 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.19■□□□□ 0.18
CSNK1DP48730 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSNK1DP48730 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
CSNK1DP48730 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CSNK1DP48730 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 AL512638.1-201ENST00000457493 794 ntBASIC16.18■□□□□ 0.18
CSNK1DP48730 PHKG1P2-201ENST00000457537 863 ntBASIC16.18■□□□□ 0.18
CSNK1DP48730 RN7SL618P-201ENST00000477850 296 ntBASIC16.18■□□□□ 0.18
CSNK1DP48730 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.18■□□□□ 0.18
CSNK1DP48730 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 AC010336.2-201ENST00000564226 506 ntBASIC16.18■□□□□ 0.18
CSNK1DP48730 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.18■□□□□ 0.18
CSNK1DP48730 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.18■□□□□ 0.18
CSNK1DP48730 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 AL096865.1-201ENST00000606796 927 ntBASIC16.18■□□□□ 0.18
CSNK1DP48730 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.18■□□□□ 0.18
CSNK1DP48730 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSNK1DP48730 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.18■□□□□ 0.18
CSNK1DP48730 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1DP48730 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 CDC14C-201ENST00000428251 1719 ntBASIC16.17■□□□□ 0.18
CSNK1DP48730 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1DP48730 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1DP48730 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1DP48730 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms