Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.68□□□□□ -0.22
CD74P04233 AC007191.1-201ENST00000623179 2995 ntBASIC13.68□□□□□ -0.22
CD74P04233 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 AC133561.5-201ENST00000635547 218 ntBASIC13.68□□□□□ -0.22
CD74P04233 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.68□□□□□ -0.22
CD74P04233 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD74P04233 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.68□□□□□ -0.22
CD74P04233 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD74P04233 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.67□□□□□ -0.22
CD74P04233 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 C18orf15-201ENST00000623680 2534 ntBASIC13.67□□□□□ -0.22
CD74P04233 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD74P04233 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.67□□□□□ -0.22
CD74P04233 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 AC104076.2-201ENST00000448912 469 ntBASIC13.67□□□□□ -0.22
CD74P04233 TOB2P1-201ENST00000469761 992 ntBASIC13.67□□□□□ -0.22
CD74P04233 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 AC091951.1-201ENST00000512854 2465 ntBASIC13.67□□□□□ -0.22
CD74P04233 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 PI4KAP1-204ENST00000612579 1703 ntBASIC13.67□□□□□ -0.22
CD74P04233 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.67□□□□□ -0.22
CD74P04233 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CD74P04233 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD74P04233 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 LINC00528-201ENST00000600723 2160 ntBASIC13.66□□□□□ -0.22
CD74P04233 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms