Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 IGHV3-62-201ENST00000520057 340 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 AC026150.2-201ENST00000564693 1156 ntBASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 LINC02560-201ENST00000596379 459 ntBASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB1Q9Y5F3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 GK-202ENST00000378941 458 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 SPDYE14P-201ENST00000442619 822 ntBASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 AC140878.1-201ENST00000565277 250 ntBASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms