Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YIPF1Q9Y548 KRT8P37-201ENST00000451609 1420 ntBASIC16.86■□□□□ 0.29
YIPF1Q9Y548 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YIPF1Q9Y548 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
YIPF1Q9Y548 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 GIMAP3P-201ENST00000495150 836 ntBASIC16.85■□□□□ 0.29
YIPF1Q9Y548 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 AC093726.1-201ENST00000608064 963 ntBASIC16.85■□□□□ 0.29
YIPF1Q9Y548 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 Z97205.2-201ENST00000564697 1639 ntBASIC16.85■□□□□ 0.29
YIPF1Q9Y548 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YIPF1Q9Y548 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
YIPF1Q9Y548 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AL512384.1-201ENST00000406683 331 ntBASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AC098850.1-201ENST00000419919 790 ntBASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ELK1P1-201ENST00000485699 580 ntBASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LINC01115-203ENST00000606068 577 ntBASIC16.84■□□□□ 0.29
YIPF1Q9Y548 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.84■□□□□ 0.29
YIPF1Q9Y548 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
YIPF1Q9Y548 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
YIPF1Q9Y548 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
YIPF1Q9Y548 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
YIPF1Q9Y548 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 AC011495.1-201ENST00000498085 584 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 BNIP3P1-202ENST00000550043 1585 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 RRP7BP-205ENST00000566851 833 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 AC132938.2-201ENST00000579188 680 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 CTBP2P3-201ENST00000585629 1255 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 AL591163.1-201ENST00000641757 987 ntBASIC16.83■□□□□ 0.28
YIPF1Q9Y548 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
YIPF1Q9Y548 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms