Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 VN1R37P-201ENST00000419096 748 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 BMP6P1-201ENST00000431230 679 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 HNRNPH3P1-201ENST00000431935 583 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC098831.1-202ENST00000438821 336 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 MTCYBP12-201ENST00000440559 1134 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 ZNF886P-201ENST00000450781 723 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC080079.1-201ENST00000509326 1045 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 MTND2P32-201ENST00000521584 1038 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC006557.2-201ENST00000592985 1240 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AL358072.1-201ENST00000604156 575 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 MIR1199-201ENST00000621445 119 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AP000676.4-201ENST00000624659 623 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 AC079776.2-201ENST00000641154 1609 ntBASIC19.32■□□□□ 0.68
RNF216Q9NWF9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF216Q9NWF9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 NKILA-202ENST00000614771 2598 ntBASIC19.31■□□□□ 0.68
RNF216Q9NWF9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 HSPD1P16-201ENST00000402302 394 ntBASIC19.31■□□□□ 0.68
RNF216Q9NWF9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC008628.1-201ENST00000508663 265 ntBASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC133794.1-201ENST00000602731 914 ntBASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC025449.1-201ENST00000603896 529 ntBASIC19.31■□□□□ 0.68
RNF216Q9NWF9 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF216Q9NWF9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms