Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC064836.3-201ENST00000607928 673 ntBASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC010507.1-201ENST00000633895 436 ntBASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AC096734.2-201ENST00000562054 433 ntBASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 MIR4515-201ENST00000584082 81 ntBASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ZNF259P1-201ENST00000407656 1365 ntBASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
CTPS2Q9NRF8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 POU5F1P6-201ENST00000466990 990 ntBASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 AC106730.1-201ENST00000566722 1090 ntBASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms