Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 BASP1P1-201ENST00000430708 665 ntBASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AL158211.3-201ENST00000607385 239 ntBASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 AL035456.1-201ENST00000456064 1369 ntBASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
VAT1LQ9HCJ6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 BCRP1-201ENST00000444246 691 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AL512638.1-201ENST00000457493 794 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 INGX-202ENST00000489074 768 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 SPCS2P1-201ENST00000561636 679 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 AL133215.2-201ENST00000609242 977 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAT1LQ9HCJ6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAT1LQ9HCJ6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms