Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FDX1P1-201ENST00000449115 551 ntBASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 AC008677.1-201ENST00000519230 1561 ntBASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRTM1Q9HBL6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AC092474.2-201ENST00000424288 719 ntBASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AL662844.1-201ENST00000546340 181 ntBASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AL078644.1-201ENST00000609881 752 ntBASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 LINC00554-201ENST00000564841 3011 ntBASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRTM1Q9HBL6 NORAD-201ENST00000565493 5339 ntBASIC15.64■□□□□ 0.1
LRTM1Q9HBL6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 HAUS4P1-201ENST00000406739 1145 ntBASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 AC079776.4-201ENST00000511039 504 ntBASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 Z83851.2-201ENST00000609564 659 ntBASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 FLJ16779-201ENST00000612722 7638 ntBASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRTM1Q9HBL6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms