Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB1Q9H4B7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 AC140658.5-201ENST00000438532 169 ntBASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 FAAHP1-202ENST00000446499 1238 ntBASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 AC023141.13-201ENST00000604991 943 ntBASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBB1Q9H4B7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
TUBB1Q9H4B7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AC002347.1-201ENST00000569543 541 ntBASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 MIR4321-201ENST00000592276 80 ntBASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AL365330.1-201ENST00000607459 531 ntBASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBB1Q9H4B7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms