Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 METTL21AP1-201ENST00000438852 635 ntBASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AL592309.1-201ENST00000443127 649 ntBASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC069335.1-201ENST00000489972 472 ntBASIC15.09■□□□□ 0.01
UBQLN3Q9H347 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC009093.7-201ENST00000623853 1223 ntBASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC006449.6-201ENST00000612330 2296 ntBASIC15.09■□□□□ 0.01
UBQLN3Q9H347 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN3Q9H347 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 AL603832.2-201ENST00000566195 2125 ntBASIC15.08■□□□□ 0.01
UBQLN3Q9H347 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 MST1L-201ENST00000442552 2185 ntBASIC15.08■□□□□ 0.01
UBQLN3Q9H347 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
UBQLN3Q9H347 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 AL139400.1-201ENST00000366220 510 ntBASIC15.08■□□□□ 0
UBQLN3Q9H347 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.08■□□□□ 0
UBQLN3Q9H347 TSEN15P1-201ENST00000423257 515 ntBASIC15.08■□□□□ 0
UBQLN3Q9H347 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 HLA-J-203ENST00000494367 1087 ntBASIC15.08■□□□□ 0
UBQLN3Q9H347 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.08■□□□□ 0
UBQLN3Q9H347 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
UBQLN3Q9H347 KRT8P23-201ENST00000560090 1207 ntBASIC15.08■□□□□ 0
UBQLN3Q9H347 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.08■□□□□ 0
UBQLN3Q9H347 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.08■□□□□ 0
UBQLN3Q9H347 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.08■□□□□ 0
UBQLN3Q9H347 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.08■□□□□ 0
UBQLN3Q9H347 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms