Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 MIR648-201ENST00000385046 94 ntBASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 PMS2P2-201ENST00000425039 1128 ntBASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AL513190.1-201ENST00000621254 727 ntBASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 TSPY26P-202ENST00000565928 3884 ntBASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 AC073439.1-201ENST00000624121 1774 ntBASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF3BQ9BZI7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 AC144831.1-201ENST00000573312 2656 ntBASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF3BQ9BZI7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 DBET-201ENST00000630918 3363 ntBASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 KRT18P34-201ENST00000488218 1270 ntBASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 AC140113.2-201ENST00000604370 208 ntBASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 AC079781.4-201ENST00000641908 219 ntBASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF3BQ9BZI7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPF3BQ9BZI7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 AC092865.6-201ENST00000642101 219 ntBASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms