Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 YBX2P1-201ENST00000394192 760 ntBASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 GPX1P2-201ENST00000429271 606 ntBASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 AC092865.6-201ENST00000642101 219 ntBASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 AC016027.1-202ENST00000607927 1699 ntBASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YIPF4Q9BSR8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 PRAL-201ENST00000624952 3286 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 RPSAP43-201ENST00000402237 625 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC140658.5-201ENST00000438532 169 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 MIR3909-201ENST00000579518 119 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AC055717.3-201ENST00000622967 595 ntBASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YIPF4Q9BSR8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
YIPF4Q9BSR8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 NORAD-201ENST00000565493 5339 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms