Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AC009486.1-201ENST00000569860 813 ntBASIC17.19■□□□□ 0.34
RAD9AQ99638 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RAD9AQ99638 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AC010328.2-201ENST00000597698 1111 ntBASIC17.19■□□□□ 0.34
RAD9AQ99638 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AL139099.5-201ENST00000635274 300 ntBASIC17.19■□□□□ 0.34
RAD9AQ99638 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RAD9AQ99638 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RAD9AQ99638 AZGP1P1-201ENST00000411909 902 ntBASIC17.18■□□□□ 0.34
RAD9AQ99638 EEF1DP4-201ENST00000446006 880 ntBASIC17.18■□□□□ 0.34
RAD9AQ99638 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.18■□□□□ 0.34
RAD9AQ99638 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.18■□□□□ 0.34
RAD9AQ99638 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.18■□□□□ 0.34
RAD9AQ99638 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.18■□□□□ 0.34
RAD9AQ99638 AC124283.3-201ENST00000570869 594 ntBASIC17.18■□□□□ 0.34
RAD9AQ99638 MIR3615-201ENST00000581999 87 ntBASIC17.18■□□□□ 0.34
RAD9AQ99638 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.18■□□□□ 0.34
RAD9AQ99638 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.18■□□□□ 0.34
RAD9AQ99638 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAD9AQ99638 INTS4P2-202ENST00000614726 2019 ntBASIC17.18■□□□□ 0.34
RAD9AQ99638 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAD9AQ99638 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAD9AQ99638 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.17■□□□□ 0.34
RAD9AQ99638 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 BAATP1-201ENST00000412284 1225 ntBASIC17.17■□□□□ 0.34
RAD9AQ99638 GPAA1P2-201ENST00000417923 928 ntBASIC17.17■□□□□ 0.34
RAD9AQ99638 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 AC016694.1-201ENST00000434179 700 ntBASIC17.17■□□□□ 0.34
RAD9AQ99638 GOLGA2P4-201ENST00000441462 777 ntBASIC17.17■□□□□ 0.34
RAD9AQ99638 KRT8P37-201ENST00000451609 1420 ntBASIC17.17■□□□□ 0.34
RAD9AQ99638 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.17■□□□□ 0.34
RAD9AQ99638 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.17■□□□□ 0.34
RAD9AQ99638 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAD9AQ99638 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.17■□□□□ 0.34
RAD9AQ99638 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAD9AQ99638 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
RAD9AQ99638 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RAD9AQ99638 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.16■□□□□ 0.34
RAD9AQ99638 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 MIR1247-201ENST00000408206 136 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 TOMM22P5-201ENST00000416399 439 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 TARDBPP1-201ENST00000442013 1203 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.16■□□□□ 0.34
RAD9AQ99638 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
RAD9AQ99638 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.16■□□□□ 0.34
RAD9AQ99638 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms