Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 MAGEA5-201ENST00000446757 942 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC060834.1-201ENST00000443027 2032 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 HIST3H2BA-201ENST00000436555 524 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AL355864.2-201ENST00000447420 863 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC133539.2-201ENST00000604757 467 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AC141586.1-203ENST00000567242 366 ntBASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD1Q96PZ7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC016700.1-201ENST00000429424 312 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 MIR4492-201ENST00000581627 80 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 MIR4750-201ENST00000584564 56 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC006480.2-201ENST00000609770 1337 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms