Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 PCDHA14-201ENST00000506751 2298 ntBASIC17.6■□□□□ 0.41
ACAP3Q96P50 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACAP3Q96P50 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.6■□□□□ 0.41
ACAP3Q96P50 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 RPL37AP1-201ENST00000412502 279 ntBASIC17.59■□□□□ 0.41
ACAP3Q96P50 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.59■□□□□ 0.41
ACAP3Q96P50 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 AL079307.3-201ENST00000556114 283 ntBASIC17.59■□□□□ 0.41
ACAP3Q96P50 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ACAP3Q96P50 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACAP3Q96P50 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACAP3Q96P50 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACAP3Q96P50 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ACAP3Q96P50 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.58■□□□□ 0.41
ACAP3Q96P50 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACAP3Q96P50 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACAP3Q96P50 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 TEX28P1-201ENST00000613479 1221 ntBASIC17.58■□□□□ 0.4
ACAP3Q96P50 TEX28P2-201ENST00000617764 1221 ntBASIC17.58■□□□□ 0.4
ACAP3Q96P50 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACAP3Q96P50 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
ACAP3Q96P50 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.57■□□□□ 0.4
ACAP3Q96P50 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.57■□□□□ 0.4
ACAP3Q96P50 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACAP3Q96P50 AC079328.2-201ENST00000561241 3354 ntBASIC17.57■□□□□ 0.4
ACAP3Q96P50 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ACAP3Q96P50 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms