Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SNX27Q96L92 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SNX27Q96L92 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 BCYRN1-201ENST00000418539 200 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX27Q96L92 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 SERBP1P3-201ENST00000459980 809 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 RN7SL618P-201ENST00000477850 296 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX27Q96L92 AC008738.7-201ENST00000609744 511 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX27Q96L92 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX27Q96L92 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX27Q96L92 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
SNX27Q96L92 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNX27Q96L92 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SNX27Q96L92 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.46■□□□□ 0.38
SNX27Q96L92 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNX27Q96L92 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX27Q96L92 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.45■□□□□ 0.38
SNX27Q96L92 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 ZNF890P-202ENST00000530367 1156 ntBASIC17.45■□□□□ 0.38
SNX27Q96L92 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX27Q96L92 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX27Q96L92 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX27Q96L92 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX27Q96L92 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SNX27Q96L92 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX27Q96L92 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX27Q96L92 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX27Q96L92 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.44■□□□□ 0.38
SNX27Q96L92 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 SERBP1P5-201ENST00000510079 1181 ntBASIC17.44■□□□□ 0.38
SNX27Q96L92 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.44■□□□□ 0.38
SNX27Q96L92 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX27Q96L92 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 AL033527.5-202ENST00000641632 1098 ntBASIC17.44■□□□□ 0.38
SNX27Q96L92 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 AL691432.1-201ENST00000596308 1422 ntBASIC17.44■□□□□ 0.38
SNX27Q96L92 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNX27Q96L92 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX27Q96L92 AC006449.6-201ENST00000612330 2296 ntBASIC17.44■□□□□ 0.38
SNX27Q96L92 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX27Q96L92 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms