Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 AC243562.2-201ENST00000561247 970 ntBASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM5Q96HC4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM5Q96HC4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM5Q96HC4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ELL2P1-201ENST00000413990 1906 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms