Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AC093214.1-201ENST00000511688 1107 ntBASIC14.55□□□□□ -0.08
RNF138Q8WVD3 SDHAP3-202ENST00000515467 728 ntBASIC14.55□□□□□ -0.08
RNF138Q8WVD3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 SPCS2P1-201ENST00000561636 679 ntBASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 MIR4313-201ENST00000580760 101 ntBASIC14.55□□□□□ -0.08
RNF138Q8WVD3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AL096865.1-201ENST00000606796 927 ntBASIC14.55□□□□□ -0.08
RNF138Q8WVD3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
RNF138Q8WVD3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 HMGN1P19-201ENST00000436976 333 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 RPL13P2-201ENST00000440687 659 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 BCRP1-201ENST00000444246 691 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC074044.1-201ENST00000609673 707 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AC008738.7-201ENST00000609744 511 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AJ011932.1-201ENST00000621707 465 ntBASIC14.54□□□□□ -0.08
RNF138Q8WVD3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF138Q8WVD3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms