Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 KRT18P28-201ENST00000453838 1332 ntBASIC16.52■□□□□ 0.24
PTCD2Q8WV60 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 RPS6P14-201ENST00000425165 719 ntBASIC16.52■□□□□ 0.24
PTCD2Q8WV60 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 AC093724.1-201ENST00000448659 1027 ntBASIC16.52■□□□□ 0.24
PTCD2Q8WV60 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 AC093520.2-201ENST00000561830 333 ntBASIC16.52■□□□□ 0.24
PTCD2Q8WV60 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 AC048344.4-201ENST00000619744 527 ntBASIC16.52■□□□□ 0.24
PTCD2Q8WV60 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTCD2Q8WV60 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 AC024909.3-201ENST00000611513 2257 ntBASIC16.52■□□□□ 0.23
PTCD2Q8WV60 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTCD2Q8WV60 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AL139400.1-201ENST00000366220 510 ntBASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ELOCP6-201ENST00000429066 328 ntBASIC16.51■□□□□ 0.23
PTCD2Q8WV60 METTL21AP1-201ENST00000438852 635 ntBASIC16.51■□□□□ 0.23
PTCD2Q8WV60 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ELOCP12-201ENST00000458706 328 ntBASIC16.51■□□□□ 0.23
PTCD2Q8WV60 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCD2Q8WV60 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms