Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 RPS2P32-201ENST00000439199 892 ntBASIC19.84■□□□□ 0.77
RTL9Q8NET4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC106886.1-201ENST00000568660 600 ntBASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 LINC01115-203ENST00000606068 577 ntBASIC19.84■□□□□ 0.77
RTL9Q8NET4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC009053.2-201ENST00000563701 2365 ntBASIC19.84■□□□□ 0.77
RTL9Q8NET4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AC012313.1-201ENST00000593393 3059 ntBASIC19.84■□□□□ 0.77
RTL9Q8NET4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RTL9Q8NET4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTL9Q8NET4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 MYCLP2-201ENST00000449268 967 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 KRT17P8-201ENST00000540749 863 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 CTBP2P3-201ENST00000585629 1255 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 TMEM261P1-201ENST00000604899 340 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 MIR6799-201ENST00000620297 69 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.83■□□□□ 0.77
RTL9Q8NET4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTL9Q8NET4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.83■□□□□ 0.77
RTL9Q8NET4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 TMEM14DP-201ENST00000422205 345 ntBASIC19.83■□□□□ 0.76
RTL9Q8NET4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AL158212.4-201ENST00000624062 1286 ntBASIC19.83■□□□□ 0.76
RTL9Q8NET4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RTL9Q8NET4 AC106886.4-201ENST00000623557 2502 ntBASIC19.82■□□□□ 0.76
RTL9Q8NET4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 PKD1P1-201ENST00000458669 6805 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms