Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.8■□□□□ 0.28
SCML4Q8N228 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SCML4Q8N228 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.8■□□□□ 0.28
SCML4Q8N228 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 AC009477.1-201ENST00000452936 217 ntBASIC16.8■□□□□ 0.28
SCML4Q8N228 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 MIR6069-201ENST00000620069 79 ntBASIC16.8■□□□□ 0.28
SCML4Q8N228 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCML4Q8N228 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SCML4Q8N228 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.79■□□□□ 0.28
SCML4Q8N228 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.79■□□□□ 0.28
SCML4Q8N228 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 IGHV3-42-201ENST00000520410 361 ntBASIC16.79■□□□□ 0.28
SCML4Q8N228 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AC010336.2-201ENST00000564226 506 ntBASIC16.79■□□□□ 0.28
SCML4Q8N228 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.79■□□□□ 0.28
SCML4Q8N228 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCML4Q8N228 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.79■□□□□ 0.28
SCML4Q8N228 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
SCML4Q8N228 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCML4Q8N228 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 AL662844.4-201ENST00000606367 2838 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 AC134407.2-201ENST00000625089 1978 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms