Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 RPL13P2-201ENST00000440687 659 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 BX284668.4-201ENST00000453917 508 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 HNRNPUP1-201ENST00000554987 333 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC004898.1-201ENST00000451057 766 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 BRI3BPP1-201ENST00000594224 787 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 KRT8P37-201ENST00000451609 1420 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 NME4-207ENST00000450036 985 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 PTP4A1P2-201ENST00000546033 454 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC020914.3-201ENST00000594712 304 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AC245100.5-201ENST00000452108 331 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AKR7A2P1-201ENST00000460134 915 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 MIR3619-201ENST00000579667 83 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HADH-212ENST00000638621 741 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 REXO1L1P-202ENST00000608646 1974 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AC006001.1-201ENST00000325130 474 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 ADM-202ENST00000524948 584 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AC079316.1-201ENST00000548397 411 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AL365330.1-201ENST00000607459 531 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.83□□□□□ -0.84
VPS13BQ7Z7G8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms