Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTR9Q6PD62 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
CTR9Q6PD62 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTR9Q6PD62 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTR9Q6PD62 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTR9Q6PD62 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTR9Q6PD62 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTR9Q6PD62 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTR9Q6PD62 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 LINC02084-201ENST00000606069 1096 ntBASIC19.25■□□□□ 0.67
CTR9Q6PD62 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.25■□□□□ 0.67
CTR9Q6PD62 AL136982.4-201ENST00000437689 1740 ntBASIC19.25■□□□□ 0.67
CTR9Q6PD62 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTR9Q6PD62 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.24■□□□□ 0.67
CTR9Q6PD62 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.24■□□□□ 0.67
CTR9Q6PD62 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 MIR4745-201ENST00000577608 62 ntBASIC19.24■□□□□ 0.67
CTR9Q6PD62 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTR9Q6PD62 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.24■□□□□ 0.67
CTR9Q6PD62 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 SPDYE17-201ENST00000412399 783 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.23■□□□□ 0.67
CTR9Q6PD62 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTR9Q6PD62 AL139010.1-201ENST00000454878 894 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 AL512638.1-201ENST00000457493 794 ntBASIC19.23■□□□□ 0.67
CTR9Q6PD62 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms