Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNB3Q15768 RN7SL204P-201ENST00000582831 262 ntBASIC13.84□□□□□ -0.19
EFNB3Q15768 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.84□□□□□ -0.19
EFNB3Q15768 AC008761.3-201ENST00000624803 892 ntBASIC13.84□□□□□ -0.19
EFNB3Q15768 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.84□□□□□ -0.19
EFNB3Q15768 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNB3Q15768 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
EFNB3Q15768 FLJ38576-201ENST00000623820 2459 ntBASIC13.84□□□□□ -0.19
EFNB3Q15768 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNB3Q15768 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNB3Q15768 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
EFNB3Q15768 KRT8P12-202ENST00000472924 1397 ntBASIC13.83□□□□□ -0.19
EFNB3Q15768 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNB3Q15768 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNB3Q15768 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.83□□□□□ -0.19
EFNB3Q15768 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.83□□□□□ -0.19
EFNB3Q15768 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNB3Q15768 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.83□□□□□ -0.19
EFNB3Q15768 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.83□□□□□ -0.2
EFNB3Q15768 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 MRPS18AP1-201ENST00000414458 589 ntBASIC13.83□□□□□ -0.2
EFNB3Q15768 AC245100.5-201ENST00000452108 331 ntBASIC13.83□□□□□ -0.2
EFNB3Q15768 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.83□□□□□ -0.2
EFNB3Q15768 LINC02560-201ENST00000596379 459 ntBASIC13.83□□□□□ -0.2
EFNB3Q15768 AL844908.2-201ENST00000609461 460 ntBASIC13.83□□□□□ -0.2
EFNB3Q15768 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
EFNB3Q15768 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB3Q15768 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
EFNB3Q15768 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB3Q15768 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.82□□□□□ -0.2
EFNB3Q15768 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 AL592424.1-201ENST00000563624 1536 ntBASIC13.82□□□□□ -0.2
EFNB3Q15768 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 AL035633.1-201ENST00000406139 838 ntBASIC13.82□□□□□ -0.2
EFNB3Q15768 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.82□□□□□ -0.2
EFNB3Q15768 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB3Q15768 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB3Q15768 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
EFNB3Q15768 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB3Q15768 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 AC008894.3-201ENST00000624324 3103 ntBASIC13.82□□□□□ -0.2
EFNB3Q15768 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
EFNB3Q15768 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
EFNB3Q15768 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB3Q15768 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms