Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.03■□□□□ -0
PRKCDQ05655 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
PRKCDQ05655 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.03■□□□□ -0
PRKCDQ05655 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PRKCDQ05655 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PRKCDQ05655 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 AP005117.1-202ENST00000581724 1908 ntBASIC15.02■□□□□ -0
PRKCDQ05655 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.02■□□□□ -0
PRKCDQ05655 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 MRPL20P1-201ENST00000400819 433 ntBASIC15.02■□□□□ -0
PRKCDQ05655 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.02■□□□□ -0
PRKCDQ05655 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.02■□□□□ -0
PRKCDQ05655 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRKCDQ05655 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
PRKCDQ05655 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PRKCDQ05655 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.02■□□□□ -0
PRKCDQ05655 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.02■□□□□ -0
PRKCDQ05655 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.02■□□□□ -0
PRKCDQ05655 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PRKCDQ05655 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.02■□□□□ -0
PRKCDQ05655 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.02■□□□□ -0
PRKCDQ05655 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 AC138035.3-201ENST00000622706 2791 ntBASIC15.02□□□□□ -0.01
PRKCDQ05655 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PRKCDQ05655 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 AC023157.3-201ENST00000619086 2088 ntBASIC15.02□□□□□ -0.01
PRKCDQ05655 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRKCDQ05655 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.02□□□□□ -0.01
PRKCDQ05655 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PRKCDQ05655 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PRKCDQ05655 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
PRKCDQ05655 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKCDQ05655 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 HNRNPDP1-201ENST00000439535 754 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 AC018712.1-201ENST00000455767 687 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.01□□□□□ -0.01
PRKCDQ05655 UNC93B7-201ENST00000509439 705 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKCDQ05655 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKCDQ05655 OR7E47P-204ENST00000575924 449 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 TP73-AS1-207ENST00000624167 988 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 AC005593.1-201ENST00000624894 515 ntBASIC15.01□□□□□ -0.01
PRKCDQ05655 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKCDQ05655 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.01□□□□□ -0.01
PRKCDQ05655 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PRKCDQ05655 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKCDQ05655 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKCDQ05655 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms