Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.66■□□□□ 0.42
GTF2BQ00403 AC107890.1-201ENST00000422478 521 ntBASIC17.66■□□□□ 0.42
GTF2BQ00403 MTND6P24-201ENST00000440466 518 ntBASIC17.66■□□□□ 0.42
GTF2BQ00403 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2BQ00403 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.66■□□□□ 0.42
GTF2BQ00403 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 AL079307.3-201ENST00000556114 283 ntBASIC17.66■□□□□ 0.42
GTF2BQ00403 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.66■□□□□ 0.42
GTF2BQ00403 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
GTF2BQ00403 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GTF2BQ00403 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2BQ00403 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2BQ00403 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GTF2BQ00403 AC010491.1-201ENST00000563101 2797 ntBASIC17.66■□□□□ 0.42
GTF2BQ00403 OR6D1P-203ENST00000641209 4860 ntBASIC17.66■□□□□ 0.42
GTF2BQ00403 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GTF2BQ00403 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GTF2BQ00403 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.65■□□□□ 0.42
GTF2BQ00403 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.65■□□□□ 0.42
GTF2BQ00403 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.65■□□□□ 0.42
GTF2BQ00403 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.65■□□□□ 0.42
GTF2BQ00403 HLA-V-204ENST00000476601 1289 ntBASIC17.65■□□□□ 0.42
GTF2BQ00403 RFPL4AP1-201ENST00000530883 850 ntBASIC17.65■□□□□ 0.42
GTF2BQ00403 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.65■□□□□ 0.42
GTF2BQ00403 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.65■□□□□ 0.42
GTF2BQ00403 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GTF2BQ00403 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GTF2BQ00403 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 AL365203.3-201ENST00000609742 2057 ntBASIC17.65■□□□□ 0.42
GTF2BQ00403 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 KRT8P12-202ENST00000472924 1397 ntBASIC17.65■□□□□ 0.42
GTF2BQ00403 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
GTF2BQ00403 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2BQ00403 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2BQ00403 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2BQ00403 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2BQ00403 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.64■□□□□ 0.41
GTF2BQ00403 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.64■□□□□ 0.41
GTF2BQ00403 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.64■□□□□ 0.41
GTF2BQ00403 AC069120.2-201ENST00000524091 540 ntBASIC17.64■□□□□ 0.41
GTF2BQ00403 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 DUX4L27-201ENST00000554796 1261 ntBASIC17.64■□□□□ 0.41
GTF2BQ00403 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 AL589739.1-201ENST00000607720 493 ntBASIC17.64■□□□□ 0.41
GTF2BQ00403 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 CETN4P-206ENST00000642099 2168 ntBASIC17.64■□□□□ 0.41
GTF2BQ00403 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2BQ00403 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
GTF2BQ00403 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GTF2BQ00403 KRT8P37-201ENST00000451609 1420 ntBASIC17.64■□□□□ 0.41
GTF2BQ00403 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms