Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 AC068137.2-201ENST00000605408 478 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 AC099063.4-201ENST00000641099 1602 ntBASIC13.16□□□□□ -0.3
CX3CL1P78423 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CL1P78423 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CX3CL1P78423 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CL1P78423 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 PMS2P7-201ENST00000506558 1336 ntBASIC13.15□□□□□ -0.3
CX3CL1P78423 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 AC092919.2-201ENST00000623631 1645 ntBASIC13.15□□□□□ -0.3
CX3CL1P78423 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 AC092474.2-201ENST00000424288 719 ntBASIC13.15□□□□□ -0.3
CX3CL1P78423 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 AP000347.1-202ENST00000435868 847 ntBASIC13.15□□□□□ -0.3
CX3CL1P78423 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CX3CL1P78423 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 LINC01144-201ENST00000626198 1710 ntBASIC13.15□□□□□ -0.3
CX3CL1P78423 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CL1P78423 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.15□□□□□ -0.3
CX3CL1P78423 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CL1P78423 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CX3CL1P78423 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
CX3CL1P78423 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.15□□□□□ -0.31
CX3CL1P78423 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.14□□□□□ -0.31
CX3CL1P78423 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CX3CL1P78423 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.14□□□□□ -0.31
CX3CL1P78423 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms