Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLDN6P56747 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN6P56747 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.54■□□□□ 0.08
CLDN6P56747 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN6P56747 AC024267.1-201ENST00000582320 895 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 RN7SL219P-201ENST00000582872 296 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 MIR6069-201ENST00000620069 79 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 FER1L4-210ENST00000615531 5998 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 AC099398.1-201ENST00000567919 2776 ntBASIC15.54■□□□□ 0.08
CLDN6P56747 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CLDN6P56747 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDN6P56747 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN6P56747 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CLDN6P56747 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN6P56747 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 MEP1AP4-201ENST00000423244 1087 ntBASIC15.53■□□□□ 0.08
CLDN6P56747 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN6P56747 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN6P56747 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN6P56747 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN6P56747 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN6P56747 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN6P56747 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN6P56747 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN6P56747 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 AL391256.1-201ENST00000443260 1855 ntBASIC15.52■□□□□ 0.08
CLDN6P56747 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CLDN6P56747 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 AC018665.1-201ENST00000622927 1362 ntBASIC15.52■□□□□ 0.08
CLDN6P56747 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CLDN6P56747 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
CLDN6P56747 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN6P56747 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN6P56747 USP32P1-208ENST00000506594 1164 ntBASIC15.52■□□□□ 0.08
CLDN6P56747 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN6P56747 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN6P56747 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN6P56747 AC124947.2-201ENST00000547118 1133 ntBASIC15.52■□□□□ 0.08
CLDN6P56747 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN6P56747 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN6P56747 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms