Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LIMK1P53667 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16■□□□□ 0.15
LIMK1P53667 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16■□□□□ 0.15
LIMK1P53667 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LIMK1P53667 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16■□□□□ 0.15
LIMK1P53667 KLF2P4-201ENST00000451959 1225 ntBASIC16■□□□□ 0.15
LIMK1P53667 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16■□□□□ 0.15
LIMK1P53667 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16■□□□□ 0.15
LIMK1P53667 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16■□□□□ 0.15
LIMK1P53667 APRT-204ENST00000563655 709 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LIMK1P53667 AC010319.3-201ENST00000597028 470 ntBASIC16■□□□□ 0.15
LIMK1P53667 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LIMK1P53667 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16■□□□□ 0.15
LIMK1P53667 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16■□□□□ 0.15
LIMK1P53667 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
LIMK1P53667 GOLGA2P9-201ENST00000596977 1937 ntBASIC16■□□□□ 0.15
LIMK1P53667 BCL2-203ENST00000589955 5011 ntBASIC16■□□□□ 0.15
LIMK1P53667 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LIMK1P53667 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LIMK1P53667 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK1P53667 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 LYSMD4-203ENST00000378904 2122 ntBASIC15.99■□□□□ 0.15
LIMK1P53667 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LIMK1P53667 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 SPDYE17-201ENST00000412399 783 ntBASIC15.99■□□□□ 0.15
LIMK1P53667 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK1P53667 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
LIMK1P53667 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.99■□□□□ 0.15
LIMK1P53667 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK1P53667 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 RN7SL190P-201ENST00000582519 257 ntBASIC15.99■□□□□ 0.15
LIMK1P53667 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.99■□□□□ 0.15
LIMK1P53667 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LIMK1P53667 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK1P53667 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK1P53667 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LIMK1P53667 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK1P53667 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK1P53667 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK1P53667 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK1P53667 AC093525.8-201ENST00000624099 1342 ntBASIC15.98■□□□□ 0.15
LIMK1P53667 PCDHA1-201ENST00000378133 2726 ntBASIC15.98■□□□□ 0.15
LIMK1P53667 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LIMK1P53667 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms