Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PDX1P52945 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.77■□□□□ 0.12
PDX1P52945 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PDX1P52945 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.77■□□□□ 0.12
PDX1P52945 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 AC098859.1-201ENST00000502915 1238 ntBASIC15.77■□□□□ 0.12
PDX1P52945 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 API5-211ENST00000534695 560 ntTSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 TP53TG3HP-202ENST00000569755 579 ntBASIC15.77■□□□□ 0.12
PDX1P52945 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.77■□□□□ 0.12
PDX1P52945 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
PDX1P52945 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.77■□□□□ 0.12
PDX1P52945 AC004790.1-201ENST00000612686 536 ntBASIC15.77■□□□□ 0.12
PDX1P52945 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDX1P52945 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.77■□□□□ 0.11
PDX1P52945 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
PDX1P52945 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PDX1P52945 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDX1P52945 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.76■□□□□ 0.11
PDX1P52945 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PDX1P52945 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.76■□□□□ 0.11
PDX1P52945 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.76■□□□□ 0.11
PDX1P52945 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.76■□□□□ 0.11
PDX1P52945 AL008721.1-201ENST00000609964 604 ntBASIC15.76■□□□□ 0.11
PDX1P52945 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PDX1P52945 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.76■□□□□ 0.11
PDX1P52945 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PDX1P52945 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDX1P52945 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 AC079328.2-201ENST00000561241 3354 ntBASIC15.76■□□□□ 0.11
PDX1P52945 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.76■□□□□ 0.11
PDX1P52945 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 CU639417.3-201ENST00000624240 1404 ntBASIC15.76■□□□□ 0.11
PDX1P52945 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.76■□□□□ 0.11
PDX1P52945 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PDX1P52945 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
PDX1P52945 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 AL603756.1-201ENST00000606511 2163 ntBASIC15.75■□□□□ 0.11
PDX1P52945 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PDX1P52945 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 RNA5SP410-201ENST00000516285 106 ntBASIC15.75■□□□□ 0.11
PDX1P52945 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
PDX1P52945 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms