Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN3P51790 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN3P51790 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CLCN3P51790 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CLCN3P51790 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLCN3P51790 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN3P51790 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.76■□□□□ 0.43
CLCN3P51790 AL589987.1-201ENST00000453380 819 ntBASIC17.76■□□□□ 0.43
CLCN3P51790 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 API5-211ENST00000534695 560 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCN3P51790 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLCN3P51790 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN3P51790 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN3P51790 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN3P51790 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.75■□□□□ 0.43
CLCN3P51790 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN3P51790 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CLCN3P51790 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CLCN3P51790 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCN3P51790 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN3P51790 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN3P51790 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN3P51790 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN3P51790 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCN3P51790 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CLCN3P51790 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLCN3P51790 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLCN3P51790 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms