Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
COPB2P35606 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.5■□□□□ 0.55
COPB2P35606 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COPB2P35606 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COPB2P35606 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COPB2P35606 AC245100.5-201ENST00000452108 331 ntBASIC18.5■□□□□ 0.55
COPB2P35606 TIMM17BP1-201ENST00000545713 516 ntBASIC18.5■□□□□ 0.55
COPB2P35606 AC106886.1-201ENST00000568660 600 ntBASIC18.5■□□□□ 0.55
COPB2P35606 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.5■□□□□ 0.55
COPB2P35606 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.5■□□□□ 0.55
COPB2P35606 IGHV3-72-202ENST00000621503 303 ntBASIC18.5■□□□□ 0.55
COPB2P35606 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.5■□□□□ 0.55
COPB2P35606 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 CYP4F24P-201ENST00000586049 1580 ntBASIC18.5■□□□□ 0.55
COPB2P35606 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COPB2P35606 PKD1P1-201ENST00000458669 6805 ntBASIC18.5■□□□□ 0.55
COPB2P35606 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
COPB2P35606 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
COPB2P35606 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.5■□□□□ 0.55
COPB2P35606 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COPB2P35606 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.49■□□□□ 0.55
COPB2P35606 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
COPB2P35606 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COPB2P35606 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 AC106886.4-201ENST00000623557 2502 ntBASIC18.49■□□□□ 0.55
COPB2P35606 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COPB2P35606 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.49■□□□□ 0.55
COPB2P35606 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
COPB2P35606 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.49■□□□□ 0.55
COPB2P35606 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.49■□□□□ 0.55
COPB2P35606 WASH4P-201ENST00000564273 1246 ntBASIC18.49■□□□□ 0.55
COPB2P35606 AC025048.3-201ENST00000590609 569 ntBASIC18.49■□□□□ 0.55
COPB2P35606 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.49■□□□□ 0.55
COPB2P35606 AL162274.1-201ENST00000617191 1098 ntBASIC18.49■□□□□ 0.55
COPB2P35606 AC005702.4-201ENST00000618393 416 ntBASIC18.49■□□□□ 0.55
COPB2P35606 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COPB2P35606 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.49■□□□□ 0.55
COPB2P35606 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COPB2P35606 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.49■□□□□ 0.55
COPB2P35606 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.49■□□□□ 0.55
COPB2P35606 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COPB2P35606 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COPB2P35606 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
COPB2P35606 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COPB2P35606 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.48■□□□□ 0.55
COPB2P35606 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.48■□□□□ 0.55
COPB2P35606 MYCLP2-201ENST00000449268 967 ntBASIC18.48■□□□□ 0.55
COPB2P35606 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COPB2P35606 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.48■□□□□ 0.55
COPB2P35606 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.48■□□□□ 0.55
COPB2P35606 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.48■□□□□ 0.55
COPB2P35606 AC023310.3-201ENST00000557027 670 ntBASIC18.48■□□□□ 0.55
COPB2P35606 AC100756.1-201ENST00000562736 682 ntBASIC18.48■□□□□ 0.55
COPB2P35606 AC138749.3-201ENST00000567691 622 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms