Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 AC040169.1-201ENST00000565382 521 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.11■□□□□ 0.01
UBL4AP11441 AC002347.1-201ENST00000569543 541 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 AP002472.1-201ENST00000577490 586 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 AL078644.1-201ENST00000609881 752 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 AC016027.1-202ENST00000607927 1699 ntBASIC15.11■□□□□ 0.01
UBL4AP11441 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL4AP11441 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBL4AP11441 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UBL4AP11441 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL4AP11441 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL4AP11441 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL4AP11441 POLD2P1-201ENST00000511220 997 ntBASIC15.1■□□□□ 0.01
UBL4AP11441 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
UBL4AP11441 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
UBL4AP11441 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
UBL4AP11441 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL4AP11441 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL4AP11441 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBL4AP11441 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.09■□□□□ 0.01
UBL4AP11441 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.09■□□□□ 0.01
UBL4AP11441 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
UBL4AP11441 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL4AP11441 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL4AP11441 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL4AP11441 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.09■□□□□ 0.01
UBL4AP11441 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms