Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.15□□□□□ -0.15
CSF1P09603 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.15□□□□□ -0.15
CSF1P09603 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
CSF1P09603 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.14□□□□□ -0.15
CSF1P09603 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.14□□□□□ -0.15
CSF1P09603 AF238378.1-201ENST00000526806 358 ntBASIC14.14□□□□□ -0.15
CSF1P09603 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.14□□□□□ -0.15
CSF1P09603 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSF1P09603 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 IL9RP2-201ENST00000423948 1312 ntBASIC14.14□□□□□ -0.15
CSF1P09603 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.14□□□□□ -0.15
CSF1P09603 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSF1P09603 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSF1P09603 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 AL512652.2-201ENST00000625156 1716 ntBASIC14.13□□□□□ -0.15
CSF1P09603 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSF1P09603 PCGF3-213ENST00000620529 1899 ntBASIC14.13□□□□□ -0.15
CSF1P09603 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.13□□□□□ -0.15
CSF1P09603 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.13□□□□□ -0.15
CSF1P09603 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.13□□□□□ -0.15
CSF1P09603 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.13□□□□□ -0.15
CSF1P09603 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.13□□□□□ -0.15
CSF1P09603 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSF1P09603 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSF1P09603 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 AC016027.1-202ENST00000607927 1699 ntBASIC14.13□□□□□ -0.15
CSF1P09603 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSF1P09603 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
CSF1P09603 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.13□□□□□ -0.15
CSF1P09603 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSF1P09603 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSF1P09603 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSF1P09603 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms