Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSBP07858 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 GNAQP1-201ENST00000444815 1067 ntBASIC15.32■□□□□ 0.04
CTSBP07858 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.32■□□□□ 0.04
CTSBP07858 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.32■□□□□ 0.04
CTSBP07858 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSBP07858 AL033527.5-202ENST00000641632 1098 ntBASIC15.32■□□□□ 0.04
CTSBP07858 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTSBP07858 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSBP07858 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 BNIP3P1-202ENST00000550043 1585 ntBASIC15.32■□□□□ 0.04
CTSBP07858 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.31■□□□□ 0.04
CTSBP07858 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 RN7SL618P-201ENST00000477850 296 ntBASIC15.31■□□□□ 0.04
CTSBP07858 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.31■□□□□ 0.04
CTSBP07858 AC079416.2-201ENST00000625035 1193 ntBASIC15.31■□□□□ 0.04
CTSBP07858 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTSBP07858 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 AL596087.1-201ENST00000400979 1969 ntBASIC15.31■□□□□ 0.04
CTSBP07858 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.31■□□□□ 0.04
CTSBP07858 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSBP07858 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSBP07858 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSBP07858 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTSBP07858 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.3■□□□□ 0.04
CTSBP07858 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTSBP07858 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.3■□□□□ 0.04
CTSBP07858 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTSBP07858 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSBP07858 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.3■□□□□ 0.04
CTSBP07858 SPTLC1P1-201ENST00000447199 261 ntBASIC15.3■□□□□ 0.04
CTSBP07858 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.3■□□□□ 0.04
CTSBP07858 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms