Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.72■□□□□ 0.43
VTNP04004 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.72■□□□□ 0.43
VTNP04004 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 AC140912.1-201ENST00000577171 1054 ntBASIC17.72■□□□□ 0.43
VTNP04004 CHCHD2P3-201ENST00000603038 451 ntBASIC17.72■□□□□ 0.43
VTNP04004 AL358472.5-202ENST00000641448 1267 ntBASIC17.72■□□□□ 0.43
VTNP04004 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.72■□□□□ 0.43
VTNP04004 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 AL691432.1-201ENST00000596308 1422 ntBASIC17.72■□□□□ 0.43
VTNP04004 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
VTNP04004 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
VTNP04004 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 COX5BP8-201ENST00000416911 349 ntBASIC17.71■□□□□ 0.43
VTNP04004 NME2P1-201ENST00000426182 414 ntBASIC17.71■□□□□ 0.43
VTNP04004 DFFBP1-201ENST00000433250 979 ntBASIC17.71■□□□□ 0.43
VTNP04004 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.71■□□□□ 0.43
VTNP04004 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.71■□□□□ 0.43
VTNP04004 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.71■□□□□ 0.43
VTNP04004 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VTNP04004 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.71■□□□□ 0.43
VTNP04004 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VTNP04004 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
VTNP04004 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.71■□□□□ 0.42
VTNP04004 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VTNP04004 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.42
VTNP04004 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.7■□□□□ 0.42
VTNP04004 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VTNP04004 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.7■□□□□ 0.42
VTNP04004 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.7■□□□□ 0.42
VTNP04004 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
VTNP04004 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.7■□□□□ 0.42
VTNP04004 AC025048.3-201ENST00000590609 569 ntBASIC17.7■□□□□ 0.42
VTNP04004 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VTNP04004 AC005702.4-201ENST00000618393 416 ntBASIC17.7■□□□□ 0.42
VTNP04004 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
VTNP04004 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VTNP04004 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms