Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
PAX4O43316 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.69□□□□□ -0.54
PAX4O43316 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.69□□□□□ -0.54
PAX4O43316 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.69□□□□□ -0.54
PAX4O43316 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 AC074386.1-202ENST00000463561 864 ntBASIC11.69□□□□□ -0.54
PAX4O43316 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.69□□□□□ -0.54
PAX4O43316 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.69□□□□□ -0.54
PAX4O43316 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.69□□□□□ -0.54
PAX4O43316 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.69□□□□□ -0.54
PAX4O43316 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
PAX4O43316 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.69□□□□□ -0.54
PAX4O43316 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.69□□□□□ -0.54
PAX4O43316 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.69□□□□□ -0.54
PAX4O43316 AC040169.1-201ENST00000565382 521 ntBASIC11.69□□□□□ -0.54
PAX4O43316 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.69□□□□□ -0.54
PAX4O43316 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.69□□□□□ -0.54
PAX4O43316 AC020765.3-201ENST00000613051 740 ntBASIC11.69□□□□□ -0.54
PAX4O43316 AC108359.1-201ENST00000616451 1211 ntBASIC11.69□□□□□ -0.54
PAX4O43316 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.69□□□□□ -0.54
PAX4O43316 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PAX4O43316 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
PAX4O43316 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.69□□□□□ -0.54
PAX4O43316 AL512652.2-201ENST00000625156 1716 ntBASIC11.69□□□□□ -0.54
PAX4O43316 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.68□□□□□ -0.54
PAX4O43316 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.68□□□□□ -0.54
PAX4O43316 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-206ENST00000376090 689 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-209ENST00000376096 565 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-210ENST00000376099 610 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 MIR574-201ENST00000385209 96 ntBASIC11.68□□□□□ -0.54
PAX4O43316 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-214ENST00000418507 726 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.68□□□□□ -0.54
PAX4O43316 POLD2P1-201ENST00000511220 997 ntBASIC11.68□□□□□ -0.54
PAX4O43316 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.68□□□□□ -0.54
PAX4O43316 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
PAX4O43316 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.68□□□□□ -0.54
PAX4O43316 PDPK2P-202ENST00000562415 1191 ntBASIC11.68□□□□□ -0.54
PAX4O43316 AC002347.1-201ENST00000569543 541 ntBASIC11.68□□□□□ -0.54
PAX4O43316 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.68□□□□□ -0.54
PAX4O43316 AC068137.2-201ENST00000605408 478 ntBASIC11.68□□□□□ -0.54
PAX4O43316 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
PAX4O43316 SNX33P1-201ENST00000592116 1762 ntBASIC11.68□□□□□ -0.54
PAX4O43316 AL162727.3-201ENST00000635661 2787 ntBASIC11.68□□□□□ -0.54
PAX4O43316 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 AC068418.2-201ENST00000577309 3703 ntBASIC11.68□□□□□ -0.54
PAX4O43316 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
PAX4O43316 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PAX4O43316 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PAX4O43316 AL031731.1-201ENST00000642131 2094 ntBASIC11.67□□□□□ -0.54
PAX4O43316 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
PAX4O43316 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
PAX4O43316 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.67□□□□□ -0.54
PAX4O43316 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.67□□□□□ -0.54
PAX4O43316 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PAX4O43316 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PAX4O43316 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PAX4O43316 PMS2P7-201ENST00000506558 1336 ntBASIC11.67□□□□□ -0.54
PAX4O43316 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms