Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AL805961.1-201ENST00000642026 753 ntBASIC17.29■□□□□ 0.36
CEP290O15078 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 ACKR1-201ENST00000368121 1240 ntBASIC17.28■□□□□ 0.36
CEP290O15078 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CEP290O15078 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.28■□□□□ 0.36
CEP290O15078 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
CEP290O15078 TUBBP5-203ENST00000508529 1334 ntBASIC17.28■□□□□ 0.36
CEP290O15078 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.28■□□□□ 0.36
CEP290O15078 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CEP290O15078 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.28■□□□□ 0.36
CEP290O15078 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 AC024681.1-201ENST00000521917 487 ntBASIC17.28■□□□□ 0.36
CEP290O15078 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.28■□□□□ 0.36
CEP290O15078 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 AC025181.2-201ENST00000606994 802 ntBASIC17.28■□□□□ 0.36
CEP290O15078 AP001065.2-201ENST00000617205 644 ntBASIC17.28■□□□□ 0.36
CEP290O15078 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.28■□□□□ 0.36
CEP290O15078 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
CEP290O15078 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CEP290O15078 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CEP290O15078 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CEP290O15078 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.27■□□□□ 0.36
CEP290O15078 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CEP290O15078 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CEP290O15078 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.27■□□□□ 0.36
CEP290O15078 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.27■□□□□ 0.36
CEP290O15078 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.27■□□□□ 0.36
CEP290O15078 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.27■□□□□ 0.36
CEP290O15078 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEP290O15078 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CEP290O15078 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CEP290O15078 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 CD8B2-202ENST00000417670 633 ntBASIC17.27■□□□□ 0.35
CEP290O15078 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.27■□□□□ 0.35
CEP290O15078 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.27■□□□□ 0.35
CEP290O15078 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 AL031731.1-201ENST00000642131 2094 ntBASIC17.27■□□□□ 0.35
CEP290O15078 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.27■□□□□ 0.35
CEP290O15078 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
CEP290O15078 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.27■□□□□ 0.35
CEP290O15078 TUBB8P12-201ENST00000308911 1335 ntBASIC17.27■□□□□ 0.35
CEP290O15078 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 TUBB7P-202ENST00000428444 1305 ntBASIC17.27■□□□□ 0.35
CEP290O15078 TUBB8P7-204ENST00000567960 1332 ntBASIC17.27■□□□□ 0.35
CEP290O15078 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.27■□□□□ 0.35
CEP290O15078 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CEP290O15078 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.26■□□□□ 0.35
CEP290O15078 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.26■□□□□ 0.35
CEP290O15078 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.26■□□□□ 0.35
CEP290O15078 AC013355.1-201ENST00000562625 723 ntBASIC17.26■□□□□ 0.35
CEP290O15078 AC093813.1-201ENST00000605066 256 ntBASIC17.26■□□□□ 0.35
CEP290O15078 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.26■□□□□ 0.35
CEP290O15078 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CEP290O15078 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
CEP290O15078 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEP290O15078 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms