Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP2A1O14983 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A1O14983 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
ATP2A1O14983 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A1O14983 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A1O14983 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2A1O14983 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2A1O14983 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A1O14983 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A1O14983 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP2A1O14983 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A1O14983 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2A1O14983 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A1O14983 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATP2A1O14983 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ATP2A1O14983 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
ATP2A1O14983 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP2A1O14983 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP2A1O14983 TPRX2P-201ENST00000535362 881 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 AC023310.3-201ENST00000557027 670 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 AC100756.1-201ENST00000562736 682 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 RRP7BP-205ENST00000566851 833 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 AC138749.3-201ENST00000567691 622 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A1O14983 AC116165.1-201ENST00000611806 668 ntBASIC18.51■□□□□ 0.55
ATP2A1O14983 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A1O14983 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A1O14983 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ATP2A1O14983 AL691432.1-201ENST00000596308 1422 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 AC004987.2-201ENST00000395959 1148 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
ATP2A1O14983 AP006294.1-201ENST00000415407 339 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 U91328.1-201ENST00000437528 223 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A1O14983 AL589987.1-201ENST00000453380 819 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2A1O14983 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.5■□□□□ 0.55
ATP2A1O14983 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2A1O14983 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 AC008494.3-201ENST00000606615 944 ntBASIC18.5■□□□□ 0.55
ATP2A1O14983 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A1O14983 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A1O14983 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A1O14983 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2A1O14983 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A1O14983 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 Z97205.2-201ENST00000564697 1639 ntBASIC18.49■□□□□ 0.55
ATP2A1O14983 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms