Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
UBFD1O14562 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 FAAHP1-202ENST00000446499 1238 ntBASIC15.78■□□□□ 0.12
UBFD1O14562 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
UBFD1O14562 KRT18P34-201ENST00000488218 1270 ntBASIC15.78■□□□□ 0.12
UBFD1O14562 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.78■□□□□ 0.12
UBFD1O14562 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
UBFD1O14562 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 AL589702.1-201ENST00000641229 1509 ntBASIC15.78■□□□□ 0.12
UBFD1O14562 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.78■□□□□ 0.12
UBFD1O14562 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.78■□□□□ 0.12
UBFD1O14562 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBFD1O14562 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.77■□□□□ 0.12
UBFD1O14562 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
UBFD1O14562 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.77■□□□□ 0.12
UBFD1O14562 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
UBFD1O14562 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
UBFD1O14562 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
UBFD1O14562 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 AC140658.5-201ENST00000438532 169 ntBASIC15.77■□□□□ 0.12
UBFD1O14562 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.77■□□□□ 0.12
UBFD1O14562 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBFD1O14562 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
UBFD1O14562 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.77■□□□□ 0.11
UBFD1O14562 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
UBFD1O14562 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.77■□□□□ 0.11
UBFD1O14562 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
UBFD1O14562 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.77■□□□□ 0.11
UBFD1O14562 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.77■□□□□ 0.11
UBFD1O14562 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.77■□□□□ 0.11
UBFD1O14562 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBFD1O14562 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.77■□□□□ 0.11
UBFD1O14562 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.76■□□□□ 0.11
UBFD1O14562 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.76■□□□□ 0.11
UBFD1O14562 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 AC023141.13-201ENST00000604991 943 ntBASIC15.76■□□□□ 0.11
UBFD1O14562 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.76■□□□□ 0.11
UBFD1O14562 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms