Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AL589987.1-201ENST00000453380 819 ntBASIC18.75■□□□□ 0.59
USP17L11C9JVI0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AL365330.1-201ENST00000607459 531 ntBASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 MYCLP2-201ENST00000449268 967 ntBASIC18.74■□□□□ 0.59
USP17L11C9JVI0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HILS1-202ENST00000545329 423 ntBASIC18.74■□□□□ 0.59
USP17L11C9JVI0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 MIR4321-201ENST00000592276 80 ntBASIC18.74■□□□□ 0.59
USP17L11C9JVI0 AL162274.1-201ENST00000617191 1098 ntBASIC18.74■□□□□ 0.59
USP17L11C9JVI0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP17L11C9JVI0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 U82695.1-201ENST00000635752 1889 ntBASIC18.73■□□□□ 0.59
USP17L11C9JVI0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP17L11C9JVI0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms