Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XIRP2A4UGR9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.65■□□□□ 0.26
XIRP2A4UGR9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XIRP2A4UGR9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
XIRP2A4UGR9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XIRP2A4UGR9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
XIRP2A4UGR9 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.64■□□□□ 0.26
XIRP2A4UGR9 RHOXF1P1-202ENST00000635473 501 ntBASIC16.64■□□□□ 0.26
XIRP2A4UGR9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
XIRP2A4UGR9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
XIRP2A4UGR9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 RPL13AP19-201ENST00000434320 584 ntBASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AC104596.2-201ENST00000512793 793 ntBASIC16.64■□□□□ 0.25
XIRP2A4UGR9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 MIR6756-201ENST00000616240 63 ntBASIC16.64■□□□□ 0.25
XIRP2A4UGR9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XIRP2A4UGR9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 AF254983.2-201ENST00000612331 135 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PCDH8P1-201ENST00000428983 2773 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 MAGEA5-201ENST00000446757 942 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 AC091812.3-201ENST00000621362 345 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 RN7SL11P-201ENST00000471305 293 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 FGFR3P5-201ENST00000564496 886 ntBASIC16.63■□□□□ 0.25
XIRP2A4UGR9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.63■□□□□ 0.25
XIRP2A4UGR9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 AC134312.5-201ENST00000568031 1313 ntBASIC16.62■□□□□ 0.25
XIRP2A4UGR9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XIRP2A4UGR9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms