Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 OR7E47P-204ENST00000575924 449 ntBASIC15.31■□□□□ 0.04
IFT52Q9Y366 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC021097.1-201ENST00000607902 574 ntBASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC117500.6-201ENST00000624871 588 ntBASIC15.31■□□□□ 0.04
IFT52Q9Y366 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AC092910.1-201ENST00000482027 1129 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 AC093909.1-201ENST00000504731 1122 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 MIR3909-201ENST00000579518 119 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 RN7SL510P-201ENST00000581311 263 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 ACTL9-202ENST00000612068 1252 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AC148477.8-201ENST00000624298 468 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AL645728.2-201ENST00000641974 660 ntBASIC15.3■□□□□ 0.04
IFT52Q9Y366 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.3■□□□□ 0.04
IFT52Q9Y366 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFT52Q9Y366 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.29■□□□□ 0.04
IFT52Q9Y366 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFT52Q9Y366 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.29■□□□□ 0.04
IFT52Q9Y366 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms