Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 RPS8P6-201ENST00000426177 609 ntBASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC004967.1-201ENST00000453589 447 ntBASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC023141.5-201ENST00000458585 616 ntBASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC023511.2-201ENST00000618803 211 ntBASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGC3Q9UN70 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 AL139384.1-201ENST00000612143 3047 ntBASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CNN2P11-201ENST00000429351 262 ntBASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 AC243562.2-201ENST00000561247 970 ntBASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC3Q9UN70 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 AP005117.1-202ENST00000581724 1908 ntBASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 RBPMS2P1-201ENST00000437762 623 ntBASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 SPDYE14P-201ENST00000442619 822 ntBASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 AC132872.1-201ENST00000566986 1195 ntBASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms