Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC093520.2-201ENST00000561830 333 ntBASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AP000842.3-202ENST00000569238 1080 ntBASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 AC073389.1-201ENST00000595595 795 ntBASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CUEDC1Q9NWM3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC142381.1-201ENST00000426099 345 ntBASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC120057.1-201ENST00000483947 663 ntBASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC105233.2-201ENST00000523697 349 ntBASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AF228730.5-201ENST00000530288 346 ntBASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC004449.1-201ENST00000564240 433 ntBASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CUEDC1Q9NWM3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CUEDC1Q9NWM3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AC005237.2-201ENST00000434368 219 ntBASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AC025678.2-201ENST00000562061 970 ntBASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CUEDC1Q9NWM3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms