Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 AC099568.2-201ENST00000609194 695 ntBASIC19.45■□□□□ 0.7
SALL1Q9NSC2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL1Q9NSC2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 SLC7A15P-201ENST00000424028 1363 ntBASIC19.44■□□□□ 0.7
SALL1Q9NSC2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 CU639417.3-201ENST00000624240 1404 ntBASIC19.44■□□□□ 0.7
SALL1Q9NSC2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 AC087499.6-201ENST00000411576 835 ntBASIC19.44■□□□□ 0.7
SALL1Q9NSC2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL1Q9NSC2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.43■□□□□ 0.7
SALL1Q9NSC2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AC055876.2-201ENST00000531834 546 ntBASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AC243562.2-201ENST00000561247 970 ntBASIC19.43■□□□□ 0.7
SALL1Q9NSC2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 Z97205.2-201ENST00000564697 1639 ntBASIC19.43■□□□□ 0.7
SALL1Q9NSC2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.43■□□□□ 0.7
SALL1Q9NSC2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms