Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 RN7SL399P-201ENST00000471648 279 ntBASIC18.05■□□□□ 0.48
VTA1Q9NP79 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 CDC14C-201ENST00000428251 1719 ntBASIC18.05■□□□□ 0.48
VTA1Q9NP79 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
VTA1Q9NP79 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VTA1Q9NP79 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 TMEM14DP-201ENST00000422205 345 ntBASIC18.04■□□□□ 0.48
VTA1Q9NP79 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 AC036164.1-201ENST00000570544 333 ntBASIC18.04■□□□□ 0.48
VTA1Q9NP79 AC015936.2-201ENST00000593177 259 ntBASIC18.04■□□□□ 0.48
VTA1Q9NP79 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 AL158212.4-201ENST00000624062 1286 ntBASIC18.04■□□□□ 0.48
VTA1Q9NP79 UBALD1-205ENST00000590891 2641 ntBASIC18.04■□□□□ 0.48
VTA1Q9NP79 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VTA1Q9NP79 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VTA1Q9NP79 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 MIR658-201ENST00000385210 100 ntBASIC18.03■□□□□ 0.48
VTA1Q9NP79 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.03■□□□□ 0.48
VTA1Q9NP79 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VTA1Q9NP79 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VTA1Q9NP79 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VTA1Q9NP79 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms